Publications 2014 | TAGC - Theories and Approaches of Genomic Complexity

Céline Baier. Characterization of Natural Killer Cells in Polycythemia verae and Acute Myeloid Leukemia. Life Sciences [q-bio]. Aix Marseille Université, 2014. English. ⟨NNT : 2014AIXM5052⟩. ⟨tel-04673801⟩ Document type : THESE

Maria Katsogiannou, Claudia Andrieu, Virginie Baylot, Anaïs Baudot, Nelson J Dusetti, et al.. The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets.. Molecular and Cellular Proteomics, 2014, pp.3585-601. ⟨10.1074/mcp.M114.041228⟩. ⟨hal-01104661⟩ Document type : ART

Salvatore Spicuglia, E. Macintyre, J. Bond, A. Bergon, A. Durand, et al.. Cryptic XPO1-MLLT10 translocation is associated with HOXA locus deregulation in T-ALL. Blood, 2014, 124 (19), pp.3023--3025. ⟨10.1182/blood-2014-04-567636⟩. ⟨hal-01614951⟩ Document type : ART

Benoit Ballester, Alejandra Medina-Rivera, Dominic Schmidt, Mar Gonzàlez-Porta, Matthew Carlucci, et al.. Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways. eLife, 2014, 462, pp.e02626. ⟨10.7554/eLife.02626.031⟩. ⟨hal-01455448⟩ Document type : ART

Anaïs Brunon, Dalila Bovet, Aude Bourgeois, Emmanuelle Pouydebat. Motivation and Manipulation Capacities of the Blue and Yellow Macaw and the Tufted Capuchin: A Comparative Approach. Behavioural Processes, 2014, 107, pp.1-14. ⟨10.1016/j.beproc.2014.06.006⟩. ⟨hal-01478468⟩ Document type : ART

Eleonora Di Gregorio, Barbara Borroni, Elisa Giorgio, Daniela Lacerenza, Marta Ferrero, et al.. ELOVL5 Mutations Cause Spinocerebellar Ataxia 38. American Journal of Human Genetics, 2014, 95 (2), pp.209-217. ⟨10.1016/j.ajhg.2014.07.001⟩. ⟨cea-04651761⟩ Document type : ART

Agata Cieslak, Sandrine Le Noir, Amélie Trinquand, Ludovic Lhermitte, Don-Marc Franchini, et al.. RUNX1-dependent RAG1 deposition instigates human TCR-δ locus rearrangement. Journal of Experimental Medicine, 2014, 211 (9), pp.1821--1832. ⟨10.1084/jem.20132585⟩. ⟨hal-01614953⟩ Document type : ART

A. F. Evangelista, C. V. Collares, D. J. Xavier, C. Macedo, F. S. Manoel-Caetano, et al.. Integrative analysis of the transcriptome profiles observed in type 1, type 2 and gestational diabetes mellitus reveals the role of inflammation. BMC Medical Genomics, 2014, 7, pp.28. ⟨10.1186/1755-8794-7-28⟩. ⟨hal-01595812⟩ Document type : ART

R Ramy, S Garnier, Lydie Pradel, Laurence Röder, Béatrice B. Loriod, et al.. Approaches combining mice and Drosophila melanogaster models to decipher human sepsis. Critical Care, 2014, 18 (S2), ⟨10.1186/cc14070⟩. ⟨hal-01619083⟩ Document type : ART

Maria Florencia F Tevy, Denis Seyres, Laurent Perrin, Maria Capovilla. Ndae1 Expression and Regulation in Drosophila Embryos. PLoS ONE, 2014, 9 (3), pp.e92956. ⟨10.1371/journal.pone.0092956⟩. ⟨hal-02335959⟩ Document type : ART

Maria Florencia F Tevy, Denis Seyres, Concetta Traina, Laurent Perrin, Maria Capovilla. Ndae1 Expression and Regulation in Drosophila Embryos. PLoS ONE, 2014, 9 (3), pp.e92956. ⟨10.1371/journal.pone.0092956⟩. ⟨hal-01619086⟩ Document type : ART

Stéphanie Cornen, Arnaud Guille, José Adelaïde, Lynda Addou-Klouche, Pascal Finetti, et al.. Candidate Luminal B Breast Cancer Genes Identified by Genome, Gene Expression and DNA Methylation Profiling. PLoS ONE, 2014, 9 (1), pp.e81843. ⟨10.1371/journal.pone.0081843⟩. ⟨hal-01614950⟩ Document type : ART

Arnaud Defaye, Laurent Perrin. Tissue Specific RNA Isolation in Drosophila Embryos: A Strategy to Analyze Context Dependent Transcriptome Landscapes Using FACS. Graba, Yacine and Rezsohazy, René. Hox Genes, 1196, Springer New York, pp.183--195, 2014, 978-1-4939-1241-4 978-1-4939-1242-1. ⟨hal-01619085⟩ Document type : COUV

Delphine Potier, Denis Seyres, Céline Guichard, Magali Iche-Torres, Stein Aerts, et al.. Identification of cis-regulatory modules encoding temporal dynamics during development. BMC Genomics, 2014, 15 (1), pp.534. ⟨10.1186/1471-2164-15-534⟩. ⟨hal-01619084⟩ Document type : ART

Audrey Brisebarre, Brice Kumulungui, Serge Sawadogo, Alexandre Atkinson, Séverine Garnier, et al.. A genome scan for Plasmodium falciparum malaria identifies quantitative trait loci on chromosomes 5q31, 6p21.3, 17p12, and 19p13. Malaria Journal, 2014, 13, pp.198. ⟨10.1186/1475-2875-13-198⟩. ⟨hal-01461374⟩ Document type : ART

Berra Erkosar Combe, Arnaud Defaye, Noémie Bozonnet, Denis Puthier, Julien Royet, et al.. Drosophila Microbiota Modulates Host Metabolic Gene Expression via IMD/NF-κB Signaling. PLoS ONE, 2014, 9 (4), ⟨10.1371/journal.pone.0094729⟩. ⟨hal-01595964⟩ Document type : ART

Illiassou Hamidou Soumana, Béatrice B. Loriod, Sophie Ravel, Bernadette Tchicaya, Gustave Simo, et al.. The transcriptional signatures of Sodalis glossinidius in the Glossina palpalis gambiensis flies negative for Trypanosoma brucei gambiense contrast with those of this symbiont in tsetse flies positive for the parasite: possible involvement of a Sodalis-hosted prophage in fly Trypanosoma refractoriness?. Infection, Genetics and Evolution, 2014, 24, pp.41-56. ⟨10.1016/j.meegid.2014.03.005⟩. ⟨hal-01612139⟩ Document type : ART

Maria Hernandez-Valladares, Pascal Rihet, Fuad A. Iraqi. Host susceptibility to malaria in human and mice: compatible approaches to identify potential resistant genes. Physiological Genomics, 2014, 46 (1), pp.1-16. ⟨10.1152/physiolgenomics.00044.2013⟩. ⟨hal-01595905⟩ Document type : ART

Johan Panek, Hicham El Alaoui, Anne Mone, Serge Urbach, Edith Demettre, et al.. Hijacking of Host Cellular Functions by an Intracellular Parasite, the Microsporidian Anncaliia algerae. PLoS ONE, 2014, 9 (6), pp.e100791. ⟨10.1371/journal.pone.0100791⟩. ⟨hal-01053924⟩ Document type : ART

Oussema Souiai, Fatma Guerfali, Slimane Ben Miled, Christine Brun, Alia Benkahla. In silico prediction of protein-protein interactions in human macrophages. BMC Research Notes, 2014, 7 (1), pp.157. ⟨10.1186/1756-0500-7-157⟩. ⟨inserm-00981319⟩ Document type : ART

Amira Amrani, Aurélie Bergon, Hélène Holota, Christian Tamburini, Marc Garel, et al.. Transcriptomics Reveal Several Gene Expression Patterns in the Piezophile Desulfovibrio hydrothermalis in Response to Hydrostatic Pressure. PLoS ONE, 2014, 9 (9), pp.e106831. ⟨10.1371/journal.pone.0106831⟩. ⟨hal-01628348⟩ Document type : ART

Daniil Alpern, Diana Langer, Benoit Ballester, Stephanie Le Gras, Christophe Romier, et al.. TAF4, a subunit of transcription factor II D, directs promoter occupancy of nuclear receptor HNF4A during post-natal hepatocyte differentiation. eLife, 2014, 3, pp.308-312. ⟨10.7554/eLife.03613.001⟩. ⟨hal-01404987⟩ Document type : ART

E. L. Mathieu, M. Belhocine, L. T. Dao, Denis Puthier, S. Spicuglia. [Functions of lncRNA in development and diseases]. Med Sci (Paris), 2014, 30 (8-9), pp.790--796. ⟨10.1051/medsci/20143008018⟩. ⟨hal-01595813⟩ Document type : ART

Landel Véréna, Baranger Kévin, Virard Isabelle, Loriod Béatrice, Michel Khrestchatisky, et al.. Temporal gene profiling of the 5XFAD transgenic mouse model highlights the importance of microglial activation in Alzheimer’s disease. Molecular Neurodegeneration, 2014, 9, pp.33. ⟨10.1186/1750-1326-9-33⟩. ⟨inserm-01071449⟩ Document type : ART

Illiassou Hamidou Soumana, Bernadette Tchicaya, Béatrice B. Loriod, Pascal Rihet, Anne Geiger. Identification of overexpressed genes in Sodalis glossinidius inhabiting trypanosome-infected self-cured tsetse flies. Frontiers in Microbiology, 2014, 5, pp.255. ⟨10.3389/fmicb.2014.00255⟩. ⟨hal-01612141⟩ Document type : ART

Alexandre Atkinson, Jérôme Graton, Jean-Yves Le Questel. Insights into a highly conserved network of hydrogen bonds in the agonist binding site of nicotinic acetylcholine receptors: A structural and theoretical study. Proteins - Structure, Function and Bioinformatics, 2014, 82 (10), pp.2303-2317. ⟨10.1002/prot.24589⟩. ⟨hal-02142158⟩ Document type : ART