Publications 2022
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- Lin Lin, Pugui Li, Xin Liu, Xiuyuan Xie, Liping Liu, et al.. Systematic review and meta-analysis of candidate gene association studies of benign prostate hyperplasia. Systematic Reviews, BioMed Central, 2022, 11 (1), pp.60. ⟨10.1186/s13643-022-01914-7⟩. ⟨hal-03831907⟩ Document type : ART
- Anthony Baptista, Aitor Gonzalez, Anaïs Baudot. Universal multilayer network exploration by random walk with restart. Communications Physics, Nature Research, 2022, 5 (1), pp.170. ⟨10.1038/s42005-022-00937-9⟩. ⟨hal-03800682⟩ Document type : ART
- El Chérif Ibrahim, Victor Gorgievski, Pilar Ortiz-Teba, Raoul Belzeaux, Gustavo Turecki, et al.. Transcriptomic Studies of Antidepressant Action in Rodent Models of Depression: A First Meta-Analysis. International Journal of Molecular Sciences, MDPI, 2022, 23, ⟨10.3390/ijms232113543⟩. ⟨hal-03851878⟩ Document type : ART
- Dae-Kyum Kim, Benjamin Weller, Chung-Wen Lin, Dayag Sheykhkarimli, Jennifer Knapp, et al.. A proteome-scale map of the SARS-CoV-2–human contactome. Nature Biotechnology, Nature Publishing Group, 2022, ⟨10.1038/s41587-022-01475-z⟩. ⟨hal-03832174⟩ Document type : ART
- Anthony Baptista, Aitor Gonzalez, Anaïs Baudot. Universal Multilayer Network Exploration by Random Walk with Restart. 2022. ⟨hal-03372495v2⟩ Document type : UNDEFINED
- Yashbir Singh, Naidu Subbarao, Abhinav Jaimini, Quincy A Hathaway, Amina Kunovac, et al.. Genome-wide expression reveals potential biomarkers in breast cancer bone metastasis. Journal of Integrative Bioinformatics, Informationsmanagement in der Biotechnologie e.V. (IMBio e.V.), 2022, 19 (3), ⟨10.1515/jib-2021-0041⟩. ⟨hal-03831878⟩ Document type : ART
- Saswati Saha, Laurent Perrin, Laurence Röder, Christine Brun, Lionel Spinelli. Epi-MEIF: detecting higher order epistatic interactions for complex traits using mixed effect conditional inference forests. Nucleic Acids Research, Oxford University Press, 2022, pp.gkac715. ⟨10.1093/nar/gkac715⟩. ⟨hal-03800774⟩ Document type : ART
- Karla Deysiree Alcântara Silva, João Paulo Silva Nunes, Pauline Andrieux, Pauline Brochet, Rafael Ribeiro Almeida, et al.. Chagas Disease Megaesophagus Patients Carrying Variant MRPS18B P260A Display Nitro-Oxidative Stress and Mitochondrial Dysfunction in Response to IFN-γ Stimulus. Biomedicines, MDPI, 2022, 10 (9), pp.2215. ⟨10.3390/biomedicines10092215⟩. ⟨hal-03831899⟩ Document type : ART
- Pauline Brochet, Barbara Maria Ianni, Laurie Laugier, Amanda Farage Frade, João Paulo Silva Nunes, et al.. Epigenetic regulation of transcription factor binding motifs promotes Th1 response in Chagas disease cardiomyopathy. Frontiers in Immunology, Frontiers, 2022, 13, ⟨10.3389/fimmu.2022.958200⟩. ⟨hal-03831919⟩ Document type : ART
- Michael Baboudjian, Bastien Gondran Tellier, Romain Boissier, Patricia Ancel, Juline Marjollet, et al.. Enhanced level of VCAM in transplant preservation fluid is an independent predictor of Early Kidney Allograft Dysfunction. Frontiers in Immunology, Frontiers, 2022, Online ahead of print. ⟨10.3389/fimmu.2022.966951⟩. ⟨inserm-03736401⟩ Document type : ART
- Mohamed Belhocine, Mathieu Simonin, José David Abad Flores, Agata Cieslak, Iris Manosalva, et al.. Dynamics of broad H3K4me3 domains uncover an epigenetic switch between cell identity and cancer-related genes. Genome Research, 2022, 32 (7), pp.1328-1342. ⟨10.1101/gr.266924.120⟩. ⟨hal-03831947⟩ Document type : ART
- Bertrand Fabre, Sebastien Choteau, Carine Duboé, Carole Pichereaux, Audrey Montigny, et al.. In Depth Exploration of the Alternative Proteome of Drosophila melanogaster. Frontiers in Cell and Developmental Biology, 2022, 10, ⟨10.3389/fcell.2022.901351⟩. ⟨hal-03698006⟩ Document type : ART
- Walter Santana-Garcia, Jaime Castro-Mondragon, Mónica Padilla-Gálvez, Nga Nguyen, Ana Elizondo-Salas, et al.. RSAT 2022: regulatory sequence analysis tools. Nucleic Acids Research, Oxford University Press, 2022, ⟨10.1093/nar/gkac312⟩. ⟨hal-03669930⟩ Document type : ART
- Kaj Chokeshaiusaha, Thanida Sananmuang, Denis Puthier, Catherine Nguyen. A novel cross-species differential tumor classification method based on exosome-derived microRNA biomarkers established by human-dog lymphoid and mammary tumor cell lines' transcription profiles. Veterinary World, Veterinary World, 2022, 15 (5), pp.1163-1170. ⟨10.14202/vetworld.2022.1163-1170⟩. ⟨hal-03831863⟩ Document type : ART
- Samia Nisar, Magali Torres, Alassane Thiam, Bruno Pouvelle, Florian Rosier, et al.. Identification of ATP2B4 Regulatory Element Containing Functional Genetic Variants Associated with Severe Malaria. International Journal of Molecular Sciences, MDPI, 2022, 23 (9), pp.4849. ⟨10.3390/ijms23094849⟩. ⟨hal-03690258⟩ Document type : ART
- Deeya Saha, Marta Iannuccelli, Christine Brun, Andreas Zanzoni, Luana Licata. The intricacy of the viral-human protein interaction networks: resources, data and analyses. Frontiers in Microbiology, Frontiers Media, 2022, ⟨10.3389/fmicb.2022.849781⟩. ⟨hal-03631120⟩ Document type : ART
- Bernard Stikker, Grégoire Stik, Antoinette van Ouwerkerk, Lianne Trap, Salvatore Spicuglia, et al.. Severe COVID-19-associated variants linked to chemokine receptor gene control in monocytes and macrophages. Genome Biology, BioMed Central, 2022, 23 (1), pp.96. ⟨10.1186/s13059-022-02669-z⟩. ⟨hal-03685514⟩ Document type : ART
- Monique Andrade Baron, Ludmila Rodrigues Pinto Ferreira, Priscila Camillo Teixeira, Ana Iochabel Soares Moretti, Soares Moretti, et al.. Matrix Metalloproteinase 2 and 9 Enzymatic Activities are Selectively Increased in the Myocardium of Chronic Chagas Disease Cardiomyopathy Patients: Role of TIMPs. Frontiers in Cellular and Infection Microbiology, Frontiers, 2022, 12, ⟨10.3389/fcimb.2022.836242⟩. ⟨hal-03685525⟩ Document type : ART
- Justine Solignac, Laure Farnault, Thomas Robert, Raphaelle Fanciullino, Sylvain Choquet, et al.. Successful treatment with adapted high dose methotrexate in a hemodialysis patient with primary central nervous system lymphoma: 100 mg/m2 seems sufficient. Nefrologia, Sociedad Espanola de Nefrologia; 1999, 2022, 42 (2), pp.130-134. ⟨10.1016/j.nefro.2021.03.004⟩. ⟨hal-03726638⟩ Document type : ART
- Alexandre Xerri, Frédéric Gallardo, F. Kober, Calypso Mathieu, Natacha Fourny, et al.. Female hormones prevent sepsis-induced cardiac dysfunction: an experimental randomized study. Scientific Reports, Nature Publishing Group, 2022, 12 (1), pp.4939. ⟨10.1038/s41598-022-08889-4⟩. ⟨hal-03678802⟩ Document type : ART
- Antoinette van Ouwerkerk, Fernanda Bosada, Karel van Duijvenboden, Arjan Houweling, Koen Scholman, et al.. Patient-Specific TBX5-G125R Variant Induces Profound Transcriptional Deregulation and Atrial Dysfunction. Circulation, American Heart Association, 2022, 145 (8), pp.606-619. ⟨10.1161/CIRCULATIONAHA.121.054347⟩. ⟨hal-03685537⟩ Document type : ART
- Pascale Paul, Christophe Picard, Luc Lyonnet, Noémie Resseguier, Lucas Hubert, et al.. FCGR2A-HH Gene Variants Encoding the Fc Gamma Receptor for the C-Reactive Protein Are Associated with Enhanced Monocyte CD32 Expression and Cardiovascular Events' Recurrence after Primary Acute Coronary Syndrome. Biomedicines, MDPI, 2022, 10 (2), pp.495. ⟨10.3390/biomedicines10020495⟩. ⟨inserm-03581535⟩ Document type : ART
- Fayrouz Hammal, Pierre De langen, Aurélie Bergon, Fabrice Lopez, Benoit Ballester. ReMap 2022: a database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments. Nucleic Acids Research, Oxford University Press, 2022, ⟨10.1093/nar/gkab996⟩. ⟨hal-03433360⟩ Document type : ART
- Aritania Sousa Santos, Edécio Cunha-Neto, Nelson Vinicius Gonfinetti, Fernanda Bernardi Bertonha, Pauline Brochet, et al.. Prevalence of Inflammatory Pathways Over Immuno-Tolerance in Peripheral Blood Mononuclear Cells of Recent-Onset Type 1 Diabetes. Frontiers in Immunology, Frontiers, 2022, 12, ⟨10.3389/fimmu.2021.765264⟩. ⟨hal-03566521⟩ Document type : ART
- Florian Rosier, Nicolas Fernandez Nuñez, Magali Torres, Béatrice B. Loriod, Pascal Rihet, et al.. Transcriptional Response in a Sepsis Mouse Model Reflects Transcriptional Response in Sepsis Patients. International Journal of Molecular Sciences, MDPI, In press, 23 (2), pp.821. ⟨10.3390/ijms23020821⟩. ⟨hal-03528060⟩ Document type : ART
- Jérémie Perrin, Olivier Destaing, C. Brun. Discovery of potential functional paths by integration of phospho-proteomics data in the PPI network using a RWR framework. pp. 139-145, 2022, JOBIM 2022, July 05-08 - Proceedings. ⟨hal-03842445⟩ Document type : PROCEEDINGS
- Jaime A Castro-Mondragon, Rafael Riudavets-Puig, Ieva Rauluseviciute, Roza Berhanu Lemma, Laura Turchi, et al.. JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles. Nucleic Acids Research, Oxford University Press, 2022, 50 (D1), pp.D165-D173. ⟨10.1093/nar/gkab1113⟩. ⟨hal-03463821⟩ Document type : ART
