Publications 2018
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- Geir Kjetil Sandve, Marius Gheorghe, Geir Kjetil Sandve, Aziz Khan, Jeanne Chèneby, et al.. A map of direct TF–DNA interactions in the human genome. Nucleic Acids Research, Oxford University Press, 2018, 〈10.1093/nar/gky1210〉. 〈hal-01980383〉 Document type : ART
- Alassane Thiam, Sabrina Baaklini, Babacar Mbengue, Samia Nisar, Maryam Diarra, et al.. NCR3 polymorphism, haematological parameters, and severe malaria in Senegalese patients. PeerJ, PeerJ, 2018, 6, pp.e6048. 〈10.7717/peerj.6048〉. 〈hal-01947567〉 Document type : ART
- Maria Silva, Marcela Davoli-Ferreira, Tiago Medina, Renata Sesti-Costa, Grace Silva, et al.. Canonical PI3Kγ signaling in myeloid cells restricts Trypanosoma cruzi infection and dampens chagasic myocarditis. Nature Communications, Nature Publishing Group, 2018, 9 (1), 〈10.1038/s41467-018-03986-3〉. 〈hal-01784218〉 Document type : ART
- Christophe Chevillard, João Paulo Silva Nunes, Amanda Farage Frade, Rafael Ribeiro Almeida, Ramendra Pati Pandey, et al.. Disease Tolerance and Pathogen Resistance Genes May Underlie Trypanosoma cruzi Persistence and Differential Progression to Chagas Disease Cardiomyopathy. Frontiers in Immunology, Frontiers, 2018, 9, 〈10.3389/fimmu.2018.02791〉. 〈hal-01945282〉 Document type : ART
- Samuel Eneọjọ Abah, Florence Burte, S. Marquet, Biobele Brown, Francis Akinkunmi, et al.. Low plasma haptoglobin is a risk factor for life-threatening childhood severe malarial anemia and not an exclusive consequence of hemolysis. Scientific Reports, Nature Publishing Group, 2018, 8 (1), pp.17527. 〈10.1038/s41598-018-35944-w〉. 〈hal-01961667〉 Document type : ART
- Diogo Ribeiro, Galadriel Briere, Benoit Bely, Lionel Spinelli, Christine Brun. MoonDB 2.0: an updated database of extreme multifunctional and moonlighting proteins. Nucleic Acids Research, Oxford University Press, 2018, 〈10.1093/nar/gky1039〉. 〈hal-01907669〉 Document type : ART
- Hermenegildo Taboada, Niurka Meneses, Michael Dunn, Carmen Vargas-Lagunas, Natasha Buchs, et al.. Proteins in the periplasmic space and outer membrane vesicles of Rhizobium etli CE3 grown in minimal medium are largely distinct and change with growth phase. Microbiology, Microbiology Society, 2018, 〈10.1099/mic.0.000720〉. 〈hal-01981959〉 Document type : ART
- Johannes Bischof, Marilyne Duffraisse, Edy Furger, Leiore Ajuria, Guillaume Giraud, et al.. Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live Drosophila. eLife, eLife Sciences Publication, 2018, 7, 〈10.7554/eLife.38853〉. 〈hal-01882683〉 Document type : ART
- Hitoshi Shiota, Sophie Barral, Thierry Buchou, Minjia Tan, Yohann Couté, et al.. Nut Directs p300-Dependent, Genome-Wide H4 Hyperacetylation in Male Germ Cells. Cell Reports , Elsevier Inc, 2018, 24 (13), pp.3477 - 3487.e6. 〈10.1016/j.celrep.2018.08.069〉. 〈hal-01887337〉 Document type : ART
- Kaj Chokeshaiusaha, Thanida Sananmuang, Denis Puthier, Catherine Nguyen. An innovative approach to predict immune-associated genes mutually targeted by cow and human milk microRNAs expression profiles. Veterinary World, Veterinary World, 2018, 11 (9), pp.1203-1209. 〈10.14202/vetworld.2018.1203-1209〉. 〈hal-01977762〉 Document type : ART
- Nga thi thuy Nguyen, Bruno Contreras-Moreira, Jaime Castro-Mondragon, Walter Santana-Garcia, Raul Ossio, et al.. RSAT 2018: regulatory sequence analysis tools 20th anniversary. Nucleic Acids Research, Oxford University Press, 2018, 46 (W1), pp.W209 - W214. 〈10.1093/nar/gky317〉. 〈hal-01874932〉 Document type : ART
- Calypso Mathieu, Martine Desrois, Frank Kober, Nathalie Lalevee, Carole Lan, et al.. Sex-Mediated Response to the Beta-Blocker Landiolol in Sepsis. Critical Care Medicine, Lippincott, Williams & Wilkins, 2018, 46 (7), pp.e684 - e691. 〈10.1097/CCM.0000000000003146〉. 〈hal-01844468〉 Document type : ART
- Axel Aigle, Patricia Bonin, Nicolas Fernandez -Nunez, Béatrice Loriod, Sophie Guasco, et al.. The nature of electron acceptor (MnIV/NO3) triggers differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3. FEMS Microbiology Letters, Wiley-Blackwell, In press, 〈10.1093/femsle/fny068〉. 〈hal-01766209〉 Document type : ART
- Salvatore Spicuglia, Lan T.M. Dao. Transcriptional regulation by promoters with enhancer function. Transcription, Taylor & Francis, 2018, 〈10.1080/21541264.2018.1486150〉. 〈hal-01816890〉 Document type : ART
- G. Venton, P. Suchon, J. Colle, C. Baier, F. Sanderson, et al.. Hematopoietic reconstitution after autologous hematopoietic stem cell transplantation: do CD45 (+) CD34 (+) CD38 (−) progenitors really matter in real life?. Transfusion and Apheresis Science, Elsevier, 2018, 57 (3), pp.406-408. 〈10.1016/j.transci.2018.04.021〉. 〈hal-01977309〉 Document type : ART
- Alejandra Medina-Rivera, David Santiago-Algarra, Denis Puthier, Salvatore Spicuglia. Widespread Enhancer Activity from Core Promoters. Trends in Biochemical Sciences, Elsevier, 2018, 43 (6), pp.452 - 468. 〈10.1016/j.tibs.2018.03.004〉. 〈hal-01808594〉 Document type : ART
- Yasmine Labiad, Geoffroy Venton, Farnault Laure, Céline Baier, Julien Colle, et al.. A transcriptomic signature predicting septic outcome in patients undergoing autologous stem cell transplantation. Experimental Hematology, Elsevier, 2018, 〈10.1016/j.exphem.2018.06.001〉. 〈hal-01850637〉 Document type : ART
- Dimitri Desvillechabrol, Rachel Legendre, Claire Rioualen, Christiane Bouchier, Jacques Van Helden, et al.. Sequanix: a dynamic graphical interface for Snakemake workflows. Bioinformatics, Oxford University Press (OUP), 2018, 34 (11), pp.1934 - 1936. 〈10.1093/bioinformatics/bty034〉. 〈hal-01874933〉 Document type : ART
- Maria Spletter, Christiane Barz, Assa Yeroslaviz, Xu Zhang, Sandra Lemke, et al.. A transcriptomics resource reveals a transcriptional transition during ordered sarcomere morphogenesis in flight muscle. eLife, eLife Sciences Publication, 2018, 7, 〈10.7554/eLife.34058〉. 〈hal-01874574〉 Document type : ART
- Franck Thuny, Stéphane Ederhy, Marion Escudier, Nathalie Lalevee, Jennifer Cautela. Response by Thuny et al to Letter Regarding Article, “Clinical Features, Management, and Outcomes of Immune Checkpoint Inhibitor–Related Cardiotoxicity”. 2018, pp.2423 - 2424. 〈10.1161/CIRCULATIONAHA.118.033783〉. 〈hal-01843016〉 Document type : OTHER
- Ngoc Thy Nguyen, Romain R Vivès, Magali Torres, Vincent Delauzun, Els Saesen, et al.. Genetic and enzymatic characterization of 3-O-sulfotransferase SNPs associated with Plasmodium falciparum parasitaemia. Glycobiology, Oxford University Press (OUP), 2018, 28 (7), pp.534-541. 〈10.1093/glycob/cwy038〉. 〈hal-01788019〉 Document type : ART
- Jonathan Bond, Christine Tran Quang, Guillaume Hypolite, Mohamed Belhocine, Aurélie Bergon, et al.. Novel Intergenically Spliced Chimera, NFATC3-PLA2G15 , Is Associated with Aggressive T-ALL Biology and Outcome. Molecular Cancer Research, American Association for Cancer Research, 2018, 〈10.1158/1541-7786.MCR-17-0442〉. 〈hal-01716815〉 Document type : ART
- Kaj Chokeshaiusaha, Denis Puthier, Catherine Nguyen, Thanida Sananmuang. A demonstration of the H3 trimethylation ChIP-seq analysis of galline follicular mesenchymal cells and male germ cells. Asian-Australasian journal of animal sciences, The Asian-australasian Association of Animal, 2018, 〈10.5713/ajas.17.0744〉. 〈hal-01743254〉 Document type : ART
- Diogo Ribeiro, Andreas Zanzoni, Andrea Cipriano, Riccardo Delli ponti, Lionel Spinelli, et al.. Protein complex scaffolding predicted as a prevalent function of long non-coding RNAs. Nucleic Acids Research, Oxford University Press, 2018, 〈10.1093/nar/gkx1169〉. 〈hal-01644177〉 Document type : ART
- Robin Van der lee, Benoit Ballester, François Parcy, Aziz Khan, Oriol Fornés, et al.. JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Research, Oxford University Press, 2018, 46 (D1), pp.D1284-D1284. 〈10.1093/nar/gkx1188〉. 〈hal-01980416〉 Document type : ART
- Jeanne Chèneby, Marius Gheorghe, Marie Artufel, Anthony Mathelier, Benoit Ballester. ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments. Nucleic Acids Research, Oxford University Press, 2018, 46 (D1), pp.D267-D275. 〈10.1093/nar/gkx1092〉. 〈hal-01646201〉 Document type : ART
- Caroline Choquet, Thi Hong Minh Nguyen, Pierre Sicard, Emeline Buttigieg, Thi Thom Tran, et al.. Deletion of Nkx2-5 in trabecular myocardium reveals the developmental origins of pathological heterogeneity associated with ventricular non-compaction cardiomyopathy. PLoS Genetics, Public Library of Science, 2018, 14 (7), pp.e1007502. 〈10.1371/journal.pgen.1007502〉. 〈hal-01832385〉 Document type : ART
- Aziz Khan, Oriol Fornés, Arnaud Stigliani, Marius Gheorghe, Jaime A. Castro-Mondragon, et al.. JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework. Nucleic Acids Research, Oxford University Press, 2018, 46 (D1), pp.D260-D266. 〈10.1093/nar/gkx1126〉. 〈hal-01646126〉 Document type : ART
