Publications 2020

Laurie Laugier, Ludmila Ferreira, Frederico Ferreira, Sandrine Cabantous, Amanda Frade, et al.. miRNAs may play a major role in the control of gene expression in key pathobiological processes in Chagas disease cardiomyopathy. PLoS Neglected Tropical Diseases, Public Library of Science, 2020, 14, ⟨10.1371/journal.pntd.0008889⟩. ⟨hal-03111790⟩ Document type : ART
Jennifer Cautela, Sarah Zeriouh, Melanie Gaubert, Laurent Bonello, Marc Laine, et al.. Intensified immunosuppressive therapy in patients with immune checkpoint inhibitor-induced myocarditis. Journal for Immunotherapy of Cancer, BMJ Publishing Group 2020, 8 (2), pp.e001887. ⟨10.1136/jitc-2020-001887⟩. ⟨hal-03096529⟩ Document type : ART
Erwan Sallard, José Halloy, Didier Casane, Etienne Decroly, Jacques van Helden. Tracing the origins of SARS-CoV-2 in coronavirus phylogenies. médecine/sciences, EDP Sciences, In press, ⟨10.1051/medsci/2020123⟩. ⟨hal-02891455v4⟩ Document type : ART
Giovanna Ambrosini, Ilya Vorontsov, Dmitry Penzar, Romain Groux, Oriol Fornés, et al.. Insights gained from a comprehensive all- against-all transcription factor binding motif benchmarking study. Genome Biology, BioMed Central, 2020, 21 (1), ⟨10.1186/s13059-020-01996-3⟩. ⟨hal-02773294⟩ Document type : ART
Thanida Sananmuang, Denis Puthier, Catherine Nguyen, Kaj Chokeshaiusaha. Novel classifier orthologs of bovine and human oocytes matured in different melatonin environments. Theriogenology, 2020, 156, pp.82-89. ⟨10.1016/j.theriogenology.2020.06.029⟩. ⟨hal-03015699⟩ Document type : ART
Ildem Akerman, Bahar Kasaai, Alina Bazarova, Pau Sang, Isabelle Peiffer, et al.. A predictable conserved DNA base composition signature defines human core DNA replication origins. Nature Communications, Nature Publishing Group, 2020, ⟨10.1038/s41467-020-18527-0⟩. ⟨hal-02945610⟩ Document type : ART
Agata Cieslak, Guillaume Charbonnier, Melania Tesio, Eve-Lyne Mathieu, Mohamed Belhocine, et al.. Blueprint of human thymopoiesis reveals molecular mechanisms of stage-specific TCR enhancer activation. Journal of Experimental Medicine, Rockefeller University Press, 2020, 217 (9), ⟨10.1084/jem.20192360⟩. ⟨hal-03015052⟩ Document type : ART
J.P. Mevy, Béatrice Loriod, Xi Liu, Erwan Corre, Magali Torres, et al.. Response of Downy Oak (Quercus pubescens Willd.) to Climate Change: Transcriptome Assembly, Differential Gene Analysis and Targeted Metabolomics. Plants, MDPI, 2020, 9 (9), pp.1149. ⟨10.3390/plants9091149⟩. ⟨hal-02945417⟩ Document type : ART
Franck Touret, Magali Gilles, Karine Barral, Antoine Nougairède, Jacques van Helden, et al.. In vitro screening of a FDA approved chemical library reveals potential inhibitors of SARS-CoV-2 replication. Scientific Reports, Nature Publishing Group, 2020, 10 (1), pp.13093. ⟨10.1038/s41598-020-70143-6⟩. ⟨inserm-02944556⟩ Document type : ART
Erwan Sallard, José Halloy, Didier Casane, Jacques van Helden, Etienne Decroly. Retrouver les origines du SARS-CoV-2 dans les phylogénies de coronavirus. médecine/sciences, EDP Sciences, 2020, Août-Septembre 2020, 36 (8-9), pp.783-796. ⟨10.1051/medsci/2020123⟩. ⟨hal-02890450v4⟩ Type de document : ART
Pierpaolo Andriani, Christine Brun, Giuseppe Carignani, Gino Cattani. Exaptation and Beyond: Multilevel Function Evolution in Biology and Technology. Understanding Innovation Through Exaptation, Springer, Cham, pp.69-84, 2020, The Frontiers Collection, ⟨10.1007/978-3-030-45784-6_6⟩. ⟨hal-02901516⟩ Document type : COUV
Amanda Farage Frade-Barros, Barbara Maria Ianni, Sandrine Cabantous, Cristina Wide Pissetti, Bruno Saba, et al.. Polymorphisms in Genes Affecting Interferon-γ Production and Th1 T Cell Differentiation Are Associated With Progression to Chagas Disease Cardiomyopathy. Frontiers in Immunology, Frontiers, 2020, 1, ⟨10.3389/fimmu.2020.01386⟩. ⟨hal-02898299⟩ Document type : ART
Guoqiang Hua, Aurélie Bergon, Pierre Cauchy, Brigitte Kahn‐perlès, François Bertucci, et al.. ERBB2b mRNA isoform encodes a nuclear variant of the ERBB2 oncogene in breast cancer. Journal of Cellular Biochemistry, Wiley, 2020, ⟨10.1002/jcb.29762⟩. ⟨hal-02897104⟩ Document type : ART
Sandrine Cabantous, Belco Poudiougou, Aurélie Bergon, Abdoulaye Barry, Aboubacar Oumar, et al.. Understanding Human Cerebral Malaria through a Blood Transcriptomic Signature: Evidences for Erythrocyte Alteration, Immune/Inflammatory Dysregulation, and Brain Dysfunction. Mediators of Inflammation, Hindawi Publishing Corporation, 2020, 2020, pp.1-15. ⟨10.1155/2020/3280689⟩. ⟨hal-02898283⟩ Document type : ART
Darely Gutiérrez-Reyna, Alejandra Cedillo-Baños, Linda Kempis-Calanis, Oscar Ramírez-Pliego, Lisa Bargier, et al.. IL-12 Signaling Contributes to the Reprogramming of Neonatal CD8+ T Cells. Frontiers in Immunology, Frontiers, 2020, 11, ⟨10.3389/fimmu.2020.01089⟩. ⟨hal-02935693⟩ Document type : ART
Diogo Ribeiro, Alexis Prod’homme, Adrien Teixeira, Andreas Zanzoni, Christine Brun. The role of 3 UTR-protein complexes in the regulation of protein multifunctionality and subcellular localization. Nucleic Acids Research, Oxford University Press, 2020, pp.gkaa462. ⟨10.1093/nar/gkaa462⟩. ⟨hal-02773956⟩ Document type : ART
Kaj Chokeshaiusaha, Denis Puthier, Thanida Sananmuang, Em-On Olanratmanee, Catherine Nguyen, et al.. Differential DNA methylation analysis across the promoter regions using methylated DNA immunoprecipitation sequencing profiling of porcine loin muscle. Veterinary World, Veterinary World, 2020, 13, pp.1113 - 1125. ⟨10.14202/vetworld.2020.1113-1125⟩. ⟨hal-03015708⟩ Document type : ART
Jaafar Alomairi, Anne Molitor, Nori Sadouni, Saadat Hussain, Magali Torres, et al.. Integration of high-throughput reporter assays identify a critical enhancer of the Ikzf1 gene. PLoS ONE, Public Library of Science, 2020, 15 (5), pp.e0233191. ⟨10.1371/journal.pone.0233191⟩. ⟨hal-02773600⟩ Document type : ART
Naghmeh Hoghoughi, Sophie Barral, Sandrine Curtet, Florent Chuffart, Guillaume Charbonnier, et al.. RNA-Guided Genomic Localization of H2A.L.2 Histone Variant. Cells, MDPI, 2020, 9 (2), pp.474. ⟨10.3390/cells9020474⟩. ⟨hal-02773006⟩ Document type : ART
Muhammad Maqbool, Léo Pioger, Amal El Aabidine, Nezih Karasu, Anne Molitor, et al.. Alternative Enhancer Usage and Targeted Polycomb Marking Hallmark Promoter Choice during T Cell Differentiation. Cell Reports, Elsevier Inc, 2020, 32, ⟨10.1016/j.celrep.2020.108048⟩. ⟨hal-03015018⟩ Document type : ART
Oriol Fornés, Jaime Castro-Mondragon, Aziz Khan, Robin van der Lee, Xi Zhang, et al.. JASPAR 2020: update of the open-access database of transcription factor binding profiles.. Nucleic Acids Research, Oxford University Press, 2020, 48 (D1), pp.D87-D92. ⟨10.1093/nar/gkz1001⟩. ⟨hal-02365013⟩ Document type : ART