Publications 2024

Aitor González, Pascale Paul. Pleiotropic Expression Quantitative Trait Loci Are Enriched in Enhancers and Transcription Factor Binding Sites and Impact More Genes. Computational and Structural Biotechnology Journal, In press, ⟨10.1016/j.csbj.2024.11.019⟩. ⟨hal-04787752⟩ Document type : ART
Aitor González, Pascale Paul. Pleiotropic Expression Quantitative Trait Loci Are Enriched in Enhancers and Transcription Factor Binding Sites and Impact More of Genes.. Computational and Structural Biotechnology Journal, In press, ⟨10.1016/j.csbj.2024.11.019⟩. ⟨hal-04789676⟩ Document type : ART
Lucie Khamvongsa-Charbonnier, Laurent Kremmer, Magali Torres, Sallouha Krifa, Charis Aubert, et al.. Metabolism fine tuning and cardiokines secretion represent adaptative responses of the heart to High Fat and High Sugar Diets in flies. 2024. ⟨hal-04733833⟩ Document type : UNDEFINED
Katell Audouin, Saswati Saha, Laurence Röder, Sallouha Krifa, Nathalie Arquier, et al.. Natural variations of aging of cardiac performance in Drosophila identifies a central function for the PAR domain bZIP transcription factor Pdp1 / dHLF in cardiac senescence. 2024. ⟨hal-04728528⟩ Document type : UNDEFINED
Katell Audouin, Saswati Saha, Laurence Röder, Sallouha Krifa, Nathalie Arquier, et al.. Natural variations of aging of cardiac performance in Drosophila identifies a central function for the PAR domain bZIP transcription factorPdp1/dHLF in cardiac senescence. 2024. ⟨hal-04731312⟩ Document type : UNDEFINED
Fabrice Lopez, Lionel Spinelli, Christine Brun. Clust&See3.0 : clustering, module exploration and annotation. F1000Research, 2024, 13, pp.994. ⟨10.12688/f1000research.152711.1⟩. ⟨hal-04728417⟩ Document type : ART
Héctor Castillo, Patricia Hanna, Laurent Sachs, Nicolas Buisine, Francisco Godoy, et al.. Xenopus tropicalis osteoblast-specific open chromatin regions reveal promoters and enhancers involved in human skeletal phenotypes and shed light on early vertebrate evolution. Cells & Development, 2024, 179, pp.203924. ⟨10.1016/j.cdev.2024.203924⟩. ⟨hal-04748533⟩ Document type : ART
Jean-Christophe Mouren, Antoinette van Ouwerkerk, Magali Torres, Frédéric Gallardo, Salvatore Spicuglia, et al.. Genome-wide Characterization of Exons as Regulatory Elements. JOBIM 2024 - Journées ouvertes en biologie, informatique, et mathématiques 2024, Jun 2024, Toulouse, France. ⟨hal-04633459⟩ Document type : POSTER
Hélène Chiapello, Thomas Denecker, Lucie Khamvongsa Charbonnier, Pierre Poulain, Denis Puthier, et al.. A Unix competency framework for learning bioinformatics. JOBIM 2024 - Journées ouvertes en biologie, informatique, et mathématiques 2024, Jun 2024, Toulouse, France. . ⟨hal-04619317⟩ Document type : POSTER
Jing Wan. Comprehensive mapping of human genetic variation at Epromoters. Life Sciences [q-bio]. Aix Marseille university, 2024. English. ⟨NNT : ⟩. ⟨tel-04646809⟩ Document type : THESE
Charlyne Gard, Romain Sprynski, Sébastien Nin, Hortense Vachon, Lisa Bargier, et al.. Setting up single nucleus sequencing. Assemblée générale 2024 de France Génomique, Jun 2024, Evry courcouronnes, France. ⟨hal-04635546⟩ Document type : POSTER
Mathilde Slivak, Sébastien A Choteau, Philippe Pierre, Lionel Spinelli, Andreas Zanzoni, et al.. InteractORF, predictions of human sORF functions from an interactome study. 2024. ⟨hal-04728438⟩ Document type : UNDEFINED
Pierre De langen, Benoit Ballester. MUFFIN: a suite of tools for the analysis of functional sequencing data. NAR Genomics and Bioinformatics, 2024, 6 (2), pp.lqae051. ⟨10.1093/nargab/lqae051⟩. ⟨hal-04642848⟩ Document type : ART
Mathilde Slivak, Sebastien Choteau, Philippe Pierre, Lionel Spinelli, Andreas Zanzoni, et al.. InteractORF, predictions of human sORF functions from an interactome study. JOBIM 2024, SFBI, Jun 2024, Toulouse, France. ⟨hal-04728503⟩ Document type : COMM
Mathieu Adjemout, Frederic Gallardo, Magali Torres, Alassane Thiam, Babacar Mbengue, et al.. From Genome-wide Association Studies to Functional Variants: ARL14 Cis - regulatory Variants Are Associated With Severe Malaria. Journal of Infectious Diseases, 2024, pp.jiae159. ⟨10.1093/infdis/jiae159⟩. ⟨hal-04549763⟩ Document type : ART
Mathieu Adjemout, Samia Nisar, Amélie Escandell, Hong Thu Nguyen Huu, Magali Torres, et al.. Unraveling a novel dual-function regulatory element showing epistatic interaction with a variant that escapes genome-wide association studies. 2024. ⟨hal-04746150⟩ Document type : UNDEFINED
Pierre De langen. Atlas and biological significance of transcribed intergenic regions of the human genome. Life Sciences [q-bio]. Aix-Marseille Université, 2024. English. ⟨NNT : 2023AIXM0001⟩. ⟨tel-04529320⟩ Document type : THESE
Marta F M Vieira, Guillem Hernandez, Qiyun Zhong, Miguel Arbesú, Tiago Veloso, et al.. The pathogen-encoded signalling receptor Tir exploits host-like intrinsic disorder for infection. Communications Biology, 2024, 7 (1), pp.179. ⟨10.1038/s42003-024-05856-9⟩. ⟨hal-04516018⟩ Document type : ART
Antoine Pinton, Lucien Courtois, Charlotte Doublet, Aurélie Cabannes-Hamy, Guillaume Andrieu, et al.. PHF6-altered T-ALL harbored epigenetic repressive switch at bivalent promoters and respond to 5-azacitidine and venetoclax. Clinical Cancer Research, 2024, 30 (1), pp.94-105. ⟨10.1158/1078-0432.CCR-23-2159⟩. ⟨hal-04288491⟩ Document type : ART
Christelle Dieppois, Mathieu Adjemout, Jules Cretin, Frederic Gallardo, Magali Torres, et al.. An Expression Quantitative Trait Locus of Fc Gamma Receptor Genes is Associated with Anti-Malarial IgG Responses and Infection Levels in Burkinabe Families Running Title: Association of rs1771575 with Malaria. Journal of Infectious Diseases, In press, ⟨doi.org/10.1093/infdis/jiae528⟩. ⟨hal-04750444⟩ Document type : ART
Veronika Young, Bushra Dohai, Thomas Hitch, Patrick Hyden, Benjamin Weller, et al.. A gut meta-interactome map reveals modulation of human immunity by microbiome effectors. 2024. ⟨hal-04240263v2⟩ Document type : UNDEFINED